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vtkAbstractElectronicData Class Referenceabstract

Provides access to and storage of chemical electronic data. More...

#include <vtkAbstractElectronicData.h>

Inheritance diagram for vtkAbstractElectronicData:
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Collaboration diagram for vtkAbstractElectronicData:
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Public Types

typedef vtkDataObject Superclass
 
- Public Types inherited from vtkDataObject
enum  FieldAssociations {
  FIELD_ASSOCIATION_POINTS, FIELD_ASSOCIATION_CELLS, FIELD_ASSOCIATION_NONE, FIELD_ASSOCIATION_POINTS_THEN_CELLS,
  FIELD_ASSOCIATION_VERTICES, FIELD_ASSOCIATION_EDGES, FIELD_ASSOCIATION_ROWS, NUMBER_OF_ASSOCIATIONS
}
 Possible values for the FIELD_ASSOCIATION information entry. More...
 
enum  AttributeTypes {
  POINT, CELL, FIELD, POINT_THEN_CELL,
  VERTEX, EDGE, ROW, NUMBER_OF_ATTRIBUTE_TYPES
}
 Possible attribute types. More...
 
enum  FieldOperations { FIELD_OPERATION_PRESERVED, FIELD_OPERATION_REINTERPOLATED, FIELD_OPERATION_MODIFIED, FIELD_OPERATION_REMOVED }
 Possible values for the FIELD_OPERATION information entry. More...
 
typedef vtkObject Superclass
 

Public Member Functions

virtual int IsA (const char *type)
 Return 1 if this class is the same type of (or a subclass of) the named class. More...
 
vtkAbstractElectronicData * NewInstance () const
 
void PrintSelf (ostream &os, vtkIndent indent) override
 Methods invoked by print to print information about the object including superclasses. More...
 
virtual vtkIdType GetNumberOfMOs ()=0
 Returns the number of molecular orbitals available. More...
 
virtual vtkIdType GetNumberOfElectrons ()=0
 Returns the number of electrons in the molecule. More...
 
virtual vtkImageData * GetMO (vtkIdType orbitalNumber)=0
 Returns the vtkImageData for the requested molecular orbital. More...
 
virtual vtkImageData * GetElectronDensity ()=0
 Returns vtkImageData for the molecule's electron density. More...
 
vtkImageData * GetHOMO ()
 Returns vtkImageData for the Highest Occupied Molecular Orbital. More...
 
vtkImageData * GetLUMO ()
 Returns vtkImageData for the Lowest Unoccupied Molecular Orbital. More...
 
vtkIdType GetHOMOOrbitalNumber ()
 
vtkIdType GetLUMOOrbitalNumber ()
 
bool IsHOMO (vtkIdType orbitalNumber)
 Returns true if the given orbital number is the Highest Occupied Molecular Orbital, false otherwise. More...
 
bool IsLUMO (vtkIdType orbitalNumber)
 Returns true if the given orbital number is the Lowest Unoccupied Molecular Orbital, false otherwise. More...
 
void DeepCopy (vtkDataObject *obj) override
 Deep copies the data object into this. More...
 
virtual double GetPadding ()
 Get the padding between the molecule and the cube boundaries. More...
 
- Public Member Functions inherited from vtkDataObject
vtkDataObject * NewInstance () const
 
void PrintSelf (ostream &os, vtkIndent indent) override
 Methods invoked by print to print information about the object including superclasses. More...
 
vtkMTimeType GetMTime () override
 Data objects are composite objects and need to check each part for MTime. More...
 
virtual void Initialize ()
 Restore data object to initial state,. More...
 
void ReleaseData ()
 Release data back to system to conserve memory resource. More...
 
virtual int GetDataObjectType ()
 Return class name of data type. More...
 
vtkMTimeType GetUpdateTime ()
 Used by Threaded ports to determine if they should initiate an asynchronous update (still in development). More...
 
virtual unsigned long GetActualMemorySize ()
 Return the actual size of the data in kibibytes (1024 bytes). More...
 
virtual void CopyInformationFromPipeline (vtkInformation *vtkNotUsed(info))
 Copy from the pipeline information to the data object's own information. More...
 
virtual void CopyInformationToPipeline (vtkInformation *vtkNotUsed(info))
 Copy information from this data object to the pipeline information. More...
 
void DataHasBeenGenerated ()
 This method is called by the source when it executes to generate data. More...
 
virtual void PrepareForNewData ()
 make the output data ready for new data to be inserted. More...
 
virtual int GetExtentType ()
 The ExtentType will be left as VTK_PIECES_EXTENT for data objects such as vtkPolyData and vtkUnstructuredGrid. More...
 
virtual void Crop (const int *updateExtent)
 This method crops the data object (if necessary) so that the extent matches the update extent. More...
 
virtual vtkDataSetAttributes * GetAttributes (int type)
 Returns the attributes of the data object of the specified attribute type. More...
 
virtual vtkFieldData * GetAttributesAsFieldData (int type)
 Returns the attributes of the data object as a vtkFieldData. More...
 
virtual int GetAttributeTypeForArray (vtkAbstractArray *arr)
 Retrieves the attribute type that an array came from. More...
 
virtual vtkIdType GetNumberOfElements (int type)
 Get the number of elements for a specific attribute type (POINT, CELL, etc.). More...
 
virtual vtkInformation * GetInformation ()
 Set/Get the information object associated with this data object. More...
 
virtual void SetInformation (vtkInformation *)
 Set/Get the information object associated with this data object. More...
 
virtual int GetDataReleased ()
 Get the flag indicating the data has been released. More...
 
virtual void SetFieldData (vtkFieldData *)
 Assign or retrieve a general field data to this data object. More...
 
virtual vtkFieldData * GetFieldData ()
 Assign or retrieve a general field data to this data object. More...
 
virtual void ShallowCopy (vtkDataObject *src)
 Shallow and Deep copy. More...
 
void GlobalReleaseDataFlagOn ()
 Turn on/off flag to control whether every object releases its data after being used by a filter. More...
 
void GlobalReleaseDataFlagOff ()
 Turn on/off flag to control whether every object releases its data after being used by a filter. More...
 
- Public Member Functions inherited from vtkObject
 vtkBaseTypeMacro (vtkObject, vtkObjectBase)
 
virtual void DebugOn ()
 Turn debugging output on. More...
 
virtual void DebugOff ()
 Turn debugging output off. More...
 
bool GetDebug ()
 Get the value of the debug flag. More...
 
void SetDebug (bool debugFlag)
 Set the value of the debug flag. More...
 
virtual void Modified ()
 Update the modification time for this object. More...
 
void RemoveObserver (unsigned long tag)
 
void RemoveObservers (unsigned long event)
 
void RemoveObservers (const char *event)
 
void RemoveAllObservers ()
 
int HasObserver (unsigned long event)
 
int HasObserver (const char *event)
 
int InvokeEvent (unsigned long event)
 
int InvokeEvent (const char *event)
 
unsigned long AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
 
unsigned long AddObserver (const char *event, vtkCommand *, float priority=0.0f)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
 
vtkCommand * GetCommand (unsigned long tag)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
 
void RemoveObserver (vtkCommand *)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
 
void RemoveObservers (unsigned long event, vtkCommand *)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
 
void RemoveObservers (const char *event, vtkCommand *)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
 
int HasObserver (unsigned long event, vtkCommand *)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
 
int HasObserver (const char *event, vtkCommand *)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
 
template<class U , class T >
unsigned long AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)
 Overloads to AddObserver that allow developers to add class member functions as callbacks for events. More...
 
template<class U , class T >
unsigned long AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
 Overloads to AddObserver that allow developers to add class member functions as callbacks for events. More...
 
template<class U , class T >
unsigned long AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
 Allow user to set the AbortFlagOn() with the return value of the callback method. More...
 
int InvokeEvent (unsigned long event, void *callData)
 This method invokes an event and return whether the event was aborted or not. More...
 
int InvokeEvent (const char *event, void *callData)
 This method invokes an event and return whether the event was aborted or not. More...
 
- Public Member Functions inherited from vtkObjectBase
const char * GetClassName () const
 Return the class name as a string. More...
 
virtual void Delete ()
 Delete a VTK object. More...
 
virtual void FastDelete ()
 Delete a reference to this object. More...
 
void InitializeObjectBase ()
 
void Print (ostream &os)
 Print an object to an ostream. More...
 
virtual void Register (vtkObjectBase *o)
 Increase the reference count (mark as used by another object). More...
 
virtual void UnRegister (vtkObjectBase *o)
 Decrease the reference count (release by another object). More...
 
int GetReferenceCount ()
 Return the current reference count of this object. More...
 
void SetReferenceCount (int)
 Sets the reference count. More...
 
void PrintRevisions (ostream &)
 Legacy. More...
 
virtual void PrintHeader (ostream &os, vtkIndent indent)
 Methods invoked by print to print information about the object including superclasses. More...
 
virtual void PrintTrailer (ostream &os, vtkIndent indent)
 Methods invoked by print to print information about the object including superclasses. More...
 

Static Public Member Functions

static int IsTypeOf (const char *type)
 
static vtkAbstractElectronicData * SafeDownCast (vtkObjectBase *o)
 
- Static Public Member Functions inherited from vtkDataObject
static vtkDataObject * New ()
 
static int IsTypeOf (const char *type)
 
static vtkDataObject * SafeDownCast (vtkObjectBase *o)
 
static vtkInformation * GetActiveFieldInformation (vtkInformation *info, int fieldAssociation, int attributeType)
 Return the information object within the input information object's field data corresponding to the specified association (FIELD_ASSOCIATION_POINTS or FIELD_ASSOCIATION_CELLS) and attribute (SCALARS, VECTORS, NORMALS, TCOORDS, or TENSORS) More...
 
static vtkInformation * GetNamedFieldInformation (vtkInformation *info, int fieldAssociation, const char *name)
 Return the information object within the input information object's field data corresponding to the specified association (FIELD_ASSOCIATION_POINTS or FIELD_ASSOCIATION_CELLS) and name. More...
 
static void RemoveNamedFieldInformation (vtkInformation *info, int fieldAssociation, const char *name)
 Remove the info associated with an array. More...
 
static vtkInformation * SetActiveAttribute (vtkInformation *info, int fieldAssociation, const char *attributeName, int attributeType)
 Set the named array to be the active field for the specified type (SCALARS, VECTORS, NORMALS, TCOORDS, or TENSORS) and association (FIELD_ASSOCIATION_POINTS or FIELD_ASSOCIATION_CELLS). More...
 
static void SetActiveAttributeInfo (vtkInformation *info, int fieldAssociation, int attributeType, const char *name, int arrayType, int numComponents, int numTuples)
 Set the name, array type, number of components, and number of tuples within the passed information object for the active attribute of type attributeType (in specified association, FIELD_ASSOCIATION_POINTS or FIELD_ASSOCIATION_CELLS). More...
 
static void SetPointDataActiveScalarInfo (vtkInformation *info, int arrayType, int numComponents)
 Convenience version of previous method for use (primarily) by the Imaging filters. More...
 
static const char * GetAssociationTypeAsString (int associationType)
 Given an integer association type, this static method returns a string type for the attribute (i.e. More...
 
static int GetAssociationTypeFromString (const char *associationType)
 Given an integer association type, this static method returns a string type for the attribute (i.e. More...
 
static vtkInformationStringKey * DATA_TYPE_NAME ()
 
static vtkInformationDataObjectKey * DATA_OBJECT ()
 
static vtkInformationIntegerKey * DATA_EXTENT_TYPE ()
 
static vtkInformationIntegerPointerKey * DATA_EXTENT ()
 
static vtkInformationIntegerVectorKey * ALL_PIECES_EXTENT ()
 
static vtkInformationIntegerKey * DATA_PIECE_NUMBER ()
 
static vtkInformationIntegerKey * DATA_NUMBER_OF_PIECES ()
 
static vtkInformationIntegerKey * DATA_NUMBER_OF_GHOST_LEVELS ()
 
static vtkInformationDoubleKey * DATA_TIME_STEP ()
 
static vtkInformationInformationVectorKey * POINT_DATA_VECTOR ()
 
static vtkInformationInformationVectorKey * CELL_DATA_VECTOR ()
 
static vtkInformationInformationVectorKey * VERTEX_DATA_VECTOR ()
 
static vtkInformationInformationVectorKey * EDGE_DATA_VECTOR ()
 
static vtkInformationIntegerKey * FIELD_ARRAY_TYPE ()
 
static vtkInformationIntegerKey * FIELD_ASSOCIATION ()
 
static vtkInformationIntegerKey * FIELD_ATTRIBUTE_TYPE ()
 
static vtkInformationIntegerKey * FIELD_ACTIVE_ATTRIBUTE ()
 
static vtkInformationIntegerKey * FIELD_NUMBER_OF_COMPONENTS ()
 
static vtkInformationIntegerKey * FIELD_NUMBER_OF_TUPLES ()
 
static vtkInformationIntegerKey * FIELD_OPERATION ()
 
static vtkInformationDoubleVectorKey * FIELD_RANGE ()
 
static vtkInformationIntegerVectorKey * PIECE_EXTENT ()
 
static vtkInformationStringKey * FIELD_NAME ()
 
static vtkInformationDoubleVectorKey * ORIGIN ()
 
static vtkInformationDoubleVectorKey * SPACING ()
 
static vtkInformationDoubleVectorKey * BOUNDING_BOX ()
 
static vtkInformationDataObjectKey * SIL ()
 
static vtkDataObject * GetData (vtkInformation *info)
 Retrieve an instance of this class from an information object. More...
 
static vtkDataObject * GetData (vtkInformationVector *v, int i=0)
 Retrieve an instance of this class from an information object. More...
 
static void SetGlobalReleaseDataFlag (int val)
 Turn on/off flag to control whether every object releases its data after being used by a filter. More...
 
static int GetGlobalReleaseDataFlag ()
 Turn on/off flag to control whether every object releases its data after being used by a filter. More...
 
- Static Public Member Functions inherited from vtkObject
static vtkObject * New ()
 Create an object with Debug turned off, modified time initialized to zero, and reference counting on. More...
 
static void BreakOnError ()
 This method is called when vtkErrorMacro executes. More...
 
static void SetGlobalWarningDisplay (int val)
 This is a global flag that controls whether any debug, warning or error messages are displayed. More...
 
static void GlobalWarningDisplayOn ()
 This is a global flag that controls whether any debug, warning or error messages are displayed. More...
 
static void GlobalWarningDisplayOff ()
 This is a global flag that controls whether any debug, warning or error messages are displayed. More...
 
static int GetGlobalWarningDisplay ()
 This is a global flag that controls whether any debug, warning or error messages are displayed. More...
 
- Static Public Member Functions inherited from vtkObjectBase
static vtkTypeBool IsTypeOf (const char *name)
 Return 1 if this class type is the same type of (or a subclass of) the named class. More...
 
static vtkObjectBase * New ()
 Create an object with Debug turned off, modified time initialized to zero, and reference counting on. More...
 

Protected Member Functions

virtual vtkObjectBase * NewInstanceInternal () const
 
 vtkAbstractElectronicData ()
 
 ~vtkAbstractElectronicData () override
 
- Protected Member Functions inherited from vtkDataObject
 vtkDataObject ()
 
 ~vtkDataObject () override
 
- Protected Member Functions inherited from vtkObject
 vtkObject ()
 
 ~vtkObject () override
 
void RegisterInternal (vtkObjectBase *, vtkTypeBool check) override
 
void UnRegisterInternal (vtkObjectBase *, vtkTypeBool check) override
 
void InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=NULL)
 These methods allow a command to exclusively grab all events. More...
 
void InternalReleaseFocus ()
 These methods allow a command to exclusively grab all events. More...
 
- Protected Member Functions inherited from vtkObjectBase
 vtkObjectBase ()
 
virtual ~vtkObjectBase ()
 
virtual void CollectRevisions (ostream &)
 
virtual void ReportReferences (vtkGarbageCollector *)
 
 vtkObjectBase (const vtkObjectBase &)
 
void operator= (const vtkObjectBase &)
 

Protected Attributes

double Padding
 
- Protected Attributes inherited from vtkDataObject
vtkFieldData * FieldData
 
int DataReleased
 
vtkTimeStamp UpdateTime
 
vtkInformation * Information
 
- Protected Attributes inherited from vtkObject
bool Debug
 
vtkTimeStamp MTime
 
vtkSubjectHelper * SubjectHelper
 
- Protected Attributes inherited from vtkObjectBase
vtkAtomicInt32 ReferenceCount
 
vtkWeakPointerBase ** WeakPointers
 

Detailed Description

Provides access to and storage of chemical electronic data.

Tests:
vtkAbstractElectronicData (Tests)

Definition at line 33 of file vtkAbstractElectronicData.h.

Member Typedef Documentation

◆ Superclass

Definition at line 36 of file vtkAbstractElectronicData.h.

Constructor & Destructor Documentation

◆ vtkAbstractElectronicData()

vtkAbstractElectronicData::vtkAbstractElectronicData ( )
protected

◆ ~vtkAbstractElectronicData()

vtkAbstractElectronicData::~vtkAbstractElectronicData ( )
overrideprotected

Member Function Documentation

◆ IsTypeOf()

static int vtkAbstractElectronicData::IsTypeOf ( const char *  type)
static

◆ IsA()

virtual int vtkAbstractElectronicData::IsA ( const char *  name)
virtual

Return 1 if this class is the same type of (or a subclass of) the named class.

Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkDataObject.

Reimplemented in vtkOpenQubeElectronicData, and vtkProgrammableElectronicData.

◆ SafeDownCast()

static vtkAbstractElectronicData* vtkAbstractElectronicData::SafeDownCast ( vtkObjectBase *  o)
static

◆ NewInstanceInternal()

virtual vtkObjectBase* vtkAbstractElectronicData::NewInstanceInternal ( ) const
protectedvirtual

Reimplemented from vtkDataObject.

Reimplemented in vtkOpenQubeElectronicData, and vtkProgrammableElectronicData.

◆ NewInstance()

vtkAbstractElectronicData* vtkAbstractElectronicData::NewInstance ( ) const

◆ PrintSelf()

void vtkAbstractElectronicData::PrintSelf ( ostream &  os,
vtkIndent  indent 
)
overridevirtual

Methods invoked by print to print information about the object including superclasses.

Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from vtkObject.

Reimplemented in vtkOpenQubeElectronicData, and vtkProgrammableElectronicData.

◆ GetNumberOfMOs()

virtual vtkIdType vtkAbstractElectronicData::GetNumberOfMOs ( )
pure virtual

Returns the number of molecular orbitals available.

Implemented in vtkOpenQubeElectronicData, and vtkProgrammableElectronicData.

◆ GetNumberOfElectrons()

virtual vtkIdType vtkAbstractElectronicData::GetNumberOfElectrons ( )
pure virtual

Returns the number of electrons in the molecule.

Implemented in vtkProgrammableElectronicData, and vtkOpenQubeElectronicData.

◆ GetMO()

virtual vtkImageData* vtkAbstractElectronicData::GetMO ( vtkIdType  orbitalNumber)
pure virtual

Returns the vtkImageData for the requested molecular orbital.

Implemented in vtkProgrammableElectronicData, and vtkOpenQubeElectronicData.

◆ GetElectronDensity()

virtual vtkImageData* vtkAbstractElectronicData::GetElectronDensity ( )
pure virtual

Returns vtkImageData for the molecule's electron density.

The data will be calculated when first requested, and cached for later requests.

Implemented in vtkProgrammableElectronicData, and vtkOpenQubeElectronicData.

◆ GetHOMO()

vtkImageData* vtkAbstractElectronicData::GetHOMO ( )
inline

Returns vtkImageData for the Highest Occupied Molecular Orbital.

Definition at line 63 of file vtkAbstractElectronicData.h.

◆ GetLUMO()

vtkImageData* vtkAbstractElectronicData::GetLUMO ( )
inline

Returns vtkImageData for the Lowest Unoccupied Molecular Orbital.

Definition at line 68 of file vtkAbstractElectronicData.h.

◆ GetHOMOOrbitalNumber()

vtkIdType vtkAbstractElectronicData::GetHOMOOrbitalNumber ( )
inline

Definition at line 72 of file vtkAbstractElectronicData.h.

◆ GetLUMOOrbitalNumber()

vtkIdType vtkAbstractElectronicData::GetLUMOOrbitalNumber ( )
inline

Definition at line 79 of file vtkAbstractElectronicData.h.

◆ IsHOMO()

bool vtkAbstractElectronicData::IsHOMO ( vtkIdType  orbitalNumber)
inline

Returns true if the given orbital number is the Highest Occupied Molecular Orbital, false otherwise.

Definition at line 88 of file vtkAbstractElectronicData.h.

◆ IsLUMO()

bool vtkAbstractElectronicData::IsLUMO ( vtkIdType  orbitalNumber)
inline

Returns true if the given orbital number is the Lowest Unoccupied Molecular Orbital, false otherwise.

Definition at line 97 of file vtkAbstractElectronicData.h.

◆ DeepCopy()

void vtkAbstractElectronicData::DeepCopy ( vtkDataObject *  obj)
overridevirtual

Deep copies the data object into this.

Reimplemented from vtkDataObject.

Reimplemented in vtkOpenQubeElectronicData, and vtkProgrammableElectronicData.

◆ GetPadding()

virtual double vtkAbstractElectronicData::GetPadding ( )
virtual

Get the padding between the molecule and the cube boundaries.

This is used to determine the dataset's bounds.

Reimplemented in vtkOpenQubeElectronicData, and vtkProgrammableElectronicData.

Member Data Documentation

◆ Padding

double vtkAbstractElectronicData::Padding
protected

Definition at line 119 of file vtkAbstractElectronicData.h.


The documentation for this class was generated from the following file: